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pkgbase = flair
pkgdesc = Tool for correction, isoform definition, and alternative splicing analysis of nanopore cDNA, native RNA, and PacBio sequencing reads
pkgver = 2.0.0
pkgrel = 1
url = https://github.com/BrooksLabUCSC/flair
arch = any
license = BSD
makedepends = python-setuptools
makedepends = cython
makedepends = python-build
makedepends = python-installer
makedepends = python-wheel
depends = python
depends = python-numpy
depends = python-tqdm
depends = python-ncls
depends = python-pybedtools
depends = python-mappy
depends = python-pysam
depends = bedtools
depends = samtools
depends = minimap2
optdepends = cython
optdepends = python-pandas
optdepends = python-rpy2
optdepends = r
optdepends = r-ggplot2
optdepends = r-qqman
optdepends = r-deseq2
optdepends = r-drimseq
optdepends = r-stager
optdepends = python-matplotlib
optdepends = python-seaborn
options = !emptydirs
source = https://files.pythonhosted.org/packages/source/f/flair-brookslab/flair-brookslab-2.0.0.tar.gz
sha256sums = bc1fe441e5610f19a2c95b6dc0aca588244bb7d48b3eb07b6fa424d8e251619c
pkgname = flair
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