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pkgbase = imod-binary
pkgdesc = Image-Processing, Modeling and Display Programs for Tomography and 3D Reconstruction
pkgver = 4.9.10
pkgrel = 2
url = http://bio3d.colorado.edu/imod/
arch = x86_64
license = GPL
depends = libjpeg6-turbo
depends = python
optdepends = cuda>=8.0.0: for library bindings
optdepends = tcsh: for only a few very specializied scripts
provides = 3dmod
provides = 3dmodv
provides = addtostack
provides = adocxmlconv
provides = alignframes
provides = alignlog
provides = alterheader
provides = archiveorig
provides = assemblevol
provides = autofidseed
provides = autopatchfit
provides = avganova
provides = avgstack
provides = avgstatplot
provides = b3dcatfiles
provides = b3dcopy
provides = b3dhostname
provides = b3dremove
provides = b3dtouch
provides = b3dwinps
provides = batchruntomo
provides = beadtrack
provides = binvol
provides = blendmont
provides = boxavg
provides = boxstartend
provides = calc
provides = ccderaser
provides = checkmtmod
provides = checkxforms
provides = chunksetup
provides = clip
provides = clipmodel
provides = clonemodel
provides = clonevolume
provides = collectmmm
provides = colornewst
provides = combinefft
provides = contourmod
provides = convertmod
provides = copyheader
provides = copytomocoms
provides = corrsearch3d
provides = cryoposition
provides = ctfphaseflip
provides = ctfplotter
provides = densmatch
provides = densnorm
provides = dm2mrc
provides = dm3props
provides = dualvolmatch
provides = echo2
provides = edgeeraser
provides = edgemtf
provides = edgepatches
provides = edmont
provides = edpiecepoint
provides = endmodel
provides = enhance
provides = eraser
provides = etomo
provides = etomo.jar
provides = etomoPluginDemo
provides = excise
provides = excludeviews
provides = expandargs
provides = extposition
provides = extractmagrad
provides = extractpieces
provides = extracttilts
provides = extstack
provides = fenestra
provides = fftrans
provides = fiberpitch
provides = filltomo
provides = filterplot
provides = findbeads3d
provides = findcontrast
provides = finddistort
provides = findgradient
provides = findhotpixels
provides = findsection
provides = findsirtdiffs
provides = findwarp
provides = finishjoin
provides = fitpatches
provides = fixboundaries
provides = fixmont
provides = flattenwarp
provides = framewatcher
provides = genhstplt
provides = goodframe
provides = gpumonitor
provides = gputilttest
provides = header
provides = howflared
provides = idfprocess
provides = imavgstat
provides = imod
provides = imod2meta
provides = imod2obj
provides = imod2patch
provides = imod2rib
provides = imod2vrml
provides = imod2vrml2
provides = imodauto
provides = imodchopconts
provides = imodcpuload
provides = imodcurvature
provides = imod-dist
provides = imodexplode
provides = imodextract
provides = imodfillin
provides = imodfindbeads
provides = imodhelp
provides = imodinfo
provides = imodjoin
provides = imodkillgroup
provides = imodmesh
provides = imodmop
provides = imodpsview
provides = imodqtassist
provides = imodsendevent
provides = imodsetvalues
provides = imodsortsurf
provides = imodtrans
provides = imoduntar
provides = imodv
provides = joinmodel
provides = joinwarp2model
provides = makecomfile
provides = makegradtable
provides = makejoincom
provides = makepyramid
provides = MarkersCorrespond
provides = matchorwarp
provides = matchrotpairs
provides = matchshifts
provides = matchvol
provides = maxjoinsize
provides = midas
provides = model2point
provides = montagesize
provides = mrc2tif
provides = mrcbyte
provides = mrctaper
provides = mrcx
provides = mtdetect
provides = mtffilter
provides = mtk
provides = mtlengths
provides = mtmodel
provides = mtoverlap
provides = mtpairing
provides = mtrotlong
provides = mtsmooth
provides = mtteach
provides = nad_eed_3d
provides = nda
provides = newstack
provides = numericdiff
provides = onegenplot
provides = onepatchcorr
provides = patch2imod
provides = patchcorr3d
provides = patchcrawl3d
provides = pickbestseed
provides = point2model
provides = preNAD
provides = preNID
provides = processchunks
provides = prochunks.csh
provides = queuechunk
provides = RAPTOR
provides = raw2mrc
provides = rawtiltcoords
provides = realscalemod
provides = rec2imod
provides = recombine
provides = reducecont
provides = reducemont
provides = reducemtmod
provides = refinematch
provides = remapmodel
provides = repackseed
provides = resamplemod
provides = restrictalign
provides = rotatevol
provides = rotmont
provides = runimodqtapp
provides = runraptor
provides = sampletilt
provides = scalemodel
provides = sda
provides = selfalign
provides = setlibpath
provides = settmpdir
provides = setupcombine
provides = setupcoms
provides = setuplong
provides = setupstitch
provides = sirtsetup
provides = slashfindspheres
provides = slashmasksort
provides = slurmCleanup.sh
provides = slurmInit.sh
provides = smoothsurf
provides = solvematch
provides = sortbeadsurfs
provides = splitblend
provides = splitcombine
provides = splitcorrection
provides = splitmrc
provides = splittilt
provides = squeezevol
provides = startprocess
provides = stitchalign
provides = subimage
provides = subimanova
provides = subimstat
provides = subm
provides = submfg
provides = subtomosetup
provides = subtractcurves
provides = sumdensity
provides = taperoutvol
provides = tapervoledge
provides = tif2mrc
provides = tilt
provides = tiltalign
provides = tiltxcorr
provides = tomodataplots
provides = tomopieces
provides = tomopitch
provides = tomosnapshot
provides = tomostitch
provides = transferfid
provides = trimvol
provides = vmstocsh
provides = vmstopy
provides = warpvol
provides = wmod2imod
provides = xcorrstack
provides = xf2rotmagstr
provides = xfalign
provides = xfforfidless
provides = xfinterstack
provides = xfinverse
provides = xfjointomo
provides = xfmodel
provides = xfproduct
provides = xfsimplex
provides = xftoxg
provides = xyzproj
source = https://bio3d.colorado.edu/imod/AMD64-RHEL5/imod_4.9.10_RHEL7-64_CUDA8.0.sh
source = imod.sh
md5sums = 09dea781cbefa60f1b8360ed622ab709
md5sums = 5994f7008e2b3ffd7e37339b14abb0da
pkgname = imod-binary
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