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pkgbase = meta-ugene-external_tools
pkgdesc = Metapackage for External Tools in the UGENE bioinformatics suite
pkgver = 20181009
pkgrel = 1
url = http://ugene.net/external.html
arch = any
license = none
depends = ugene-bin
depends = java-runtime>=8
depends = bedtools
depends = blast+
depends = bowtie
depends = bowtie2
depends = bwa
depends = clustal-omega
depends = clustalw
depends = mafft
depends = tcoffee
depends = mrbayes
depends = phyml
depends = kraken
depends = cufflinks-bin
depends = samtools
depends = tophat
depends = python
depends = python2
depends = perl
depends = vcftools
depends = vcfanno-bin
depends = snpeff
depends = fastqc
depends = python-cutadapt
depends = hmmer
depends = hmmer2
depends = primer3
replaces = ugene-external-tools
pkgname = meta-ugene-external_tools
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