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pkgbase = r-cnvranger
pkgdesc = Summarization and expression/phenotype association of CNV ranges
pkgver = 1.20.0
pkgrel = 1
url = https://bioconductor.org/packages/CNVRanger
arch = any
license = Artistic2.0
depends = r
depends = r-biocgenerics
depends = r-biocparallel
depends = r-data.table
depends = r-edger
depends = r-gdsarray
depends = r-gdsfmt
depends = r-genomeinfodb
depends = r-genomicranges
depends = r-iranges
depends = r-limma
depends = r-plyr
depends = r-qqman
depends = r-raggedexperiment
depends = r-rappdirs
depends = r-reshape2
depends = r-s4vectors
depends = r-snprelate
depends = r-summarizedexperiment
optdepends = r-annotationhub
optdepends = r-biocstyle
optdepends = r-bsgenome.btaurus.ucsc.bostau6.masked
optdepends = r-complexheatmap
optdepends = r-curatedtcgadata
optdepends = r-ensembldb
optdepends = r-grid
optdepends = r-gviz
optdepends = r-knitr
optdepends = r-multiassayexperiment
optdepends = r-org.hs.eg.db
optdepends = r-regioner
optdepends = r-rmarkdown
optdepends = r-statmod
optdepends = r-tcgautils
optdepends = r-txdb.hsapiens.ucsc.hg19.knowngene
source = https://bioconductor.org/packages/release/bioc/src/contrib/CNVRanger_1.20.0.tar.gz
sha256sums = f6b4c69ef4be2239f5d07ec3728288260072b7215d27dab1ffa7e6b46dda8ad3
pkgname = r-cnvranger
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