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pkgbase = r-musicatk
pkgdesc = Mutational Signature Comprehensive Analysis Toolkit
pkgver = 1.14.1
pkgrel = 1
url = https://bioconductor.org/packages/musicatk
arch = any
license = LGPL
depends = r
depends = r-biostrings
depends = r-bsgenome
depends = r-bsgenome.hsapiens.ucsc.hg19
depends = r-bsgenome.hsapiens.ucsc.hg38
depends = r-bsgenome.mmusculus.ucsc.mm10
depends = r-bsgenome.mmusculus.ucsc.mm9
depends = r-complexheatmap
depends = r-data.table
depends = r-decomptumor2sig
depends = r-deconstructsigs
depends = r-dplyr
depends = r-factoextra
depends = r-genomeinfodb
depends = r-genomicfeatures
depends = r-genomicranges
depends = r-ggplot2
depends = r-ggpubr
depends = r-ggrepel
depends = r-gridextra
depends = r-gtools
depends = r-iranges
depends = r-maftools
depends = r-magrittr
depends = r-matrixtests
depends = r-mcmcprecision
depends = r-nmf
depends = r-philentropy
depends = r-plotly
depends = r-rlang
depends = r-s4vectors
depends = r-shiny
depends = r-stringi
depends = r-stringr
depends = r-summarizedexperiment
depends = r-tibble
depends = r-tidyr
depends = r-tidyverse
depends = r-topicmodels
depends = r-txdb.hsapiens.ucsc.hg19.knowngene
depends = r-txdb.hsapiens.ucsc.hg38.knowngene
depends = r-uwot
depends = r-variantannotation
optdepends = r-biocstyle
optdepends = r-covr
optdepends = r-cowplot
optdepends = r-knitr
optdepends = r-qpdf
optdepends = r-rmarkdown
optdepends = r-shinyalert
optdepends = r-shinybs
optdepends = r-shinybusy
optdepends = r-shinydashboard
optdepends = r-shinyjqui
optdepends = r-shinyjs
optdepends = r-shinywidgets
optdepends = r-sortable
optdepends = r-survival
optdepends = r-tcgabiolinks
optdepends = r-testthat
optdepends = r-withr
optdepends = r-xvector
source = https://bioconductor.org/packages/release/bioc/src/contrib/musicatk_1.14.1.tar.gz
sha256sums = 8c04d829d6e37040d4c0293d63a1d52515b02f31ac0eb02e1172cb5ee900e3af
pkgname = r-musicatk
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