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pkgbase = scanpy
pkgdesc = Single-Cell Analysis in Python
pkgver = 1.9.1
pkgrel = 1
url = https://github.com/theislab/scanpy
arch = any
license = BSD
makedepends = python-build
makedepends = python-installer
makedepends = python-flit-core
makedepends = python-setuptools-scm
depends = python-anndata>=0.7.4
depends = python-numpy>=1.17.0
depends = python-matplotlib>=3.4
depends = python-pandas>=1.0
depends = python-scipy>=1.4
depends = python-seaborn
depends = python-h5py
depends = python-tqdm
depends = python-scikit-learn>=0.21.2
depends = python-statsmodels>=0.10.0
depends = python-patsy
depends = python-networkx>=2.3
depends = python-natsort
depends = python-joblib
depends = python-numba>=0.41.0
depends = python-umap-learn>=0.3.10
depends = python-packaging
depends = python-sinfo
optdepends = python-louvain-igraph: Louvain clustering
optdepends = python-leidenalg: leiden community detection
optdepends = python-bbknn: Batch balanced KNN (batch correction)
optdepends = python-rapids: GPU-driven calculation of neighbors
optdepends = python-magic-impute: MAGIC imputation method
optdepends = python-skmisc: For seurat_v3 highly_variable_genes method
optdepends = python-harmonypy: Harmony dataset integration algorithm
optdepends = python-scanorama: Scanorama dataset integration algorithm
optdepends = python-scrublet: Cell doublet detection
provides = scanpy
provides = python-scanpy
source = https://files.pythonhosted.org/packages/source/s/scanpy/scanpy-1.9.1.tar.gz
sha256sums = 00c9a83b649da7e0171c91e9a08cff632102faa760614fd05cd4d1dbba4eb541
pkgname = scanpy
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