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# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com>
pkgname=bamtools
pkgver=2.4.0
pkgrel=2
pkgdesc="C++ API & command-line toolkit for working with BAM data"
arch=('x86_64' 'i686')
url="https://github.com/pezmaster31/bamtools"
license=('custom')
depends=('gcc-libs' 'zlib')
makedepends=('cmake')
source=($pkgname-$pkgver.tar.gz::https://github.com/pezmaster31/bamtools/archive/v$pkgver.tar.gz
lib-destination.patch::https://github.com/pezmaster31/bamtools/pull/82.patch)
md5sums=('6139d00c1b1fe88fe15d094d8a74d8b9'
'fb81680ab082f3214dfbd409505e7fc3')
prepare() {
cd $srcdir/$pkgname-$pkgver
patch -Np1 -i $srcdir/lib-destination.patch
sed -e '/set( CMAKE_BUILD_TYPE Release )/a set( CMAKE_CXX_FLAGS_RELEASE "-std=c++98 ${CMAKE_CXX_FLAGS_RELEASE}" )' \
-i CMakeLists.txt
mkdir -p build
}
build() {
cd $srcdir/$pkgname-$pkgver/build
cmake \
-DCMAKE_INSTALL_PREFIX=/usr \
-DCMAKE_BUILD_TYPE=Release \
..
make
}
package() {
cd $srcdir/$pkgname-$pkgver/build
make DESTDIR=$pkgdir install
install -Dm644 ../LICENSE $pkgdir/usr/share/licenses/$pkgname/LICENSE
}
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