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# Maintainer: Andrew O'Neill <andrew at haunted dot sh>
# Contributor: Christian Krause ("wookietreiber") <christian.krause@mailbox.org>
pkgname=bcftools
pkgver=1.19
pkgrel=1
pkgdesc='A program for variant calling and manipulating files in the Variant Call Format (VCF) and its binary counterpart BCF'
arch=('x86_64')
url='https://samtools.github.io/bcftools'
license=('GPL-3.0-only')
depends=('gsl' 'htslib' 'python-matplotlib' 'python')
source=("https://github.com/samtools/${pkgname}/releases/download/${pkgver}/${pkgname}-${pkgver}.tar.bz2")
sha256sums=('782b5f1bc690415192231e82213b3493b047f45e630dc8ef6f154d6126ab3e68')
build() {
cd "${pkgname}-${pkgver}"
./configure \
--prefix=/usr \
--enable-libgsl \
--with-bcf-plugin-dir=/usr/lib/${pkgname} \
--with-cblas=gslcblas \
--with-htslib=system
make
}
package() {
cd "${pkgname}-${pkgver}"
make DESTDIR="${pkgdir}" install
}
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