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# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com>
pkgname=beagle-lib
pkgver=2.1.2
pkgrel=3
epoch=1
pkgdesc="general purpose library for evaluating the likelihood of sequence evolution on trees"
arch=('i686' 'x86_64')
url="https://github.com/beagle-dev/beagle-lib"
license=('GPL3')
depends=('libtool')
optdepends=('cuda-toolkit: for CUDA support'
'java-runtime: for Java support'
'libcl: for OpenCL support')
makedepends=('java-environment')
conflicts=('beagle-lib-git' 'beagle-lib-svn')
source=("https://github.com/beagle-dev/beagle-lib/archive/beagle_release_${pkgver//./_}.tar.gz")
md5sums=('1107614e86f652f8ee45c1c92f2af3d4')
prepare() {
cd $srcdir/beagle-lib-beagle_release_${pkgver//./_}
./autogen.sh
}
build() {
cd $srcdir/beagle-lib-beagle_release_${pkgver//./_}
export JAVA_HOME=/usr/lib/jvm/default
./configure \
--prefix=/usr \
--enable-openmp
make
}
check() {
cd $srcdir/beagle-lib-beagle_release_${pkgver//./_}
make check
}
package() {
cd $srcdir/beagle-lib-beagle_release_${pkgver//./_}
make DESTDIR=$pkgdir install
}
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