PKGBUILD


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# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com>

pkgname=beagle-lib
pkgver=2.1.2
pkgrel=2
epoch=1
pkgdesc="general purpose library for evaluating the likelihood of sequence evolution on trees"
arch=('i686' 'x86_64')
url="https://github.com/beagle-dev/beagle-lib"
license=('GPL3')
depends=('libtool')
optdepends=('cuda-toolkit: for CUDA support'
            'java-environment: for Java support'
            'libcl: for OpenCL support')
conflicts=('beagle-lib-git' 'beagle-lib-svn')
source=("https://github.com/beagle-dev/beagle-lib/archive/beagle_release_${pkgver//./_}.tar.gz")
md5sums=('1107614e86f652f8ee45c1c92f2af3d4')

prepare() {
  cd $srcdir/beagle-lib-beagle_release_${pkgver//./_}

  ./autogen.sh
}

build() {
  cd $srcdir/beagle-lib-beagle_release_${pkgver//./_}

  ./configure \
    --prefix=/usr \
    --enable-openmp \
    --without-opencl \
    --with-jdk=/usr/lib/jvm/java-8-openjdk

  make
}

package() {
  cd $srcdir/beagle-lib-beagle_release_${pkgver//./_}

  make DESTDIR=$pkgdir install
}