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# Maintainer: Nathaniel Stickney <nstickney@gmail.com>
# Contributor: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com>
# shellcheck disable=SC2034,SC2148,SC2154
pkgname=blast+
pkgver=2.10.0
pkgrel=1
pkgdesc="BLAST tool suite from NCBI (blastn, blastp, blastx, psiblast, etc)"
arch=('i686' 'x86_64')
url="http://blast.ncbi.nlm.nih.gov/"
license=('custom')
depends=('lmdb' 'lzo' 'pcre' 'python')
makedepends=('cpio')
conflicts=('blast' 'blast+-bin' 'ncbi-blast' 'cddlib' 'proj')
provides=('blast' 'blast+-bin''ncbi-blast')
replaces=('ncbi-blast')
source=("https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/$pkgver/ncbi-blast-$pkgver+-src.tar.gz")
sha256sums=('3acdd9cec01c4f43e56aeaf89049cb8f8013d60b9c1705eced10166967f1d926')
prepare() {
cd "$srcdir"/ncbi-blast-"$pkgver"+-src/c++ || exit
./configure \
--prefix=/usr \
--with-dll \
--with-mt \
--without-gnutls \
--without-boost \
--without-bdb
}
build() {
cd "$srcdir"/ncbi-blast-"$pkgver"+-src/c++ || exit
make
}
package() {
cd "$srcdir"/ncbi-blast-"$pkgver"+-src/c++ || exit
make prefix="$pkgdir"/usr install
chmod +x "$pkgdir"/usr/lib/*.so
install -d "$pkgdir"/usr/share/licenses/"$pkgname"
echo 'public domain' > "$pkgdir"/usr/share/licenses/"$pkgname"/LICENSE
}
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