blob: 20ac6cd9db95c0b360c9cfb1ccdc7ecce3066384 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
|
# Maintainer: Chocobo1 <chocobo1 AT archlinux DOT net>
pkgname=bowtie2-bin
pkgver=2.5.0
pkgrel=1
pkgdesc="Tool for aligning sequencing reads to long reference sequences"
arch=('x86_64' 'aarch64')
url="https://bowtie-bio.sourceforge.net/bowtie2/index.shtml"
license=('GPL')
depends=('glibc')
optdepends=('perl' 'python')
provides=("bowtie2=$pkgver")
conflicts=('bowtie2')
source_x86_64=("https://github.com/BenLangmead/bowtie2/releases/download/v$pkgver/bowtie2-$pkgver-linux-x86_64.zip")
sha256sums_x86_64=('d5428b14019691669f038f34d232ec9a6c48f435fdc2d71a8e37dc8ba7b85613')
package() {
cd "bowtie2-$pkgver-linux-$CARCH"
install -Dm755 bowtie2{,-*} -t "$pkgdir/usr/bin"
rm "$pkgdir/usr/bin"/*-debug
install -Dm644 {MANUAL,MANUAL.markdown,TUTORIAL} -t "$pkgdir/usr/share/doc/bowtie2"
install -Dm644 "doc"/* -t "$pkgdir/usr/share/doc/bowtie2/doc"
}
|