blob: 232629e6cad76e8289c720685c169844d227c61a (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
|
# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com>
pkgname=bwa
pkgver=0.7.16
_pkgver=${pkgver}a
pkgrel=1
pkgdesc="Burrows-Wheeler Aligner maps low-divergent sequences against a large reference genome"
arch=('i686' 'x86_64')
url="http://bio-bwa.sourceforge.net/"
license=('GPL3')
depends=('perl' 'zlib')
source=(https://github.com/lh3/bwa/releases/download/v$pkgver/bwa-${_pkgver}.tar.bz2)
md5sums=('c5115c9a5ea0406848500e4b23a7708c')
build() {
cd $srcdir/$pkgname-$_pkgver
make
}
package() {
cd $srcdir/$pkgname-$_pkgver
install -Dm755 bwa $pkgdir/usr/bin/bwa
install -Dm755 qualfa2fq.pl $pkgdir/usr/bin/qualfa2fq
install -Dm755 xa2multi.pl $pkgdir/usr/bin/xa2multi
install -Dm644 bwa.1 $pkgdir/usr/share/man/man1/bwa.1
}
|