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# Maintainer: Michael Schubert <mschu.dev at gmail>
pkgname=cellprofiler-analyst-git
pkgver=20121017
pkgrel=1
pkgdesc="Analysis software for cellular images"
arch=('i686' 'x86_64')
url="http://www.cellprofiler.org/"
license=('GPLv2')
depends=('cellprofiler-git')
makedepends=('git' 'python2-distribute')
provides=('cellprofiler-analyst')
conflicts=('cellprofiler-analyst')
_gitroot="git://github.com/CellProfiler/CellProfiler-Analyst.git"
_gitname="CellProfiler-Analyst"
build() {
cd "$srcdir"
msg "Connecting to GIT server...."
if [ -d $_gitname ] ; then
cd $_gitname && git pull origin
msg "The local files are updated."
else
git clone $_gitroot $_gitname
fi
cd "$srcdir/$_gitname/cpa"
CP_HOME=/usr/lib/python2.7/site-packages/cellprofiler python2 setup.py build
}
package() {
cd "$srcdir/$_gitname"
pydir=`python2 -c "from distutils.sysconfig import get_python_lib; print get_python_lib()"`
mkdir -p "$pkgdir/usr/bin"
cat > "$pkgdir/usr/bin/cpa" << EOF
#!/bin/sh
python2 "$pydir/cpa/cpa.py"
EOF
chmod 755 "$pkgdir/usr/bin/cpa"
mkdir -p "$pkgdir/$pydir"
cp -r cpa "$pkgdir/$pydir"
python2 -m compileall "$pkgdir/$pydir/cpa/" || return 0
}
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