PKGBUILD


1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55

# Maintainer: Stephen Checkley <scheckley at gmail dot com>
# Contributor: jrohwer 
pkgname=copasi-bin
pkgver=4.34.251
_pkgver=${pkgver##*.}
pkgrel=1
pkgdesc="COmplex PAthway SImulator for analysis of biochemical networks and their dynamics"
arch=('i686' 'x86_64')
url="http://www.copasi.org/"
license=('Artistic 2.0')
depends=('shared-mime-info' 'freetype2' 'glu')
source=('copasi-desktop.tar.gz')
install=copasi.install
noextract=($pkgname-$pkgver.tar.gz)
_source=https://github.com/copasi/COPASI/releases/download/Build-$_pkgver
source_i686=($pkgname-$pkgver.sh::$_source/COPASI-$pkgver-Linux-32bit.sh)
source_x86_64=($pkgname-$pkgver.sh::$_source/COPASI-$pkgver-Linux-64bit.sh)
sha256sums=('9576e4a9b2c7e74c91d0e1c0b39fcb20531e8fb4f21c5e8ac95b048609702923')
sha256sums_i686=('23ca9a82757b804cff54ac0e3eb4103aac8659b46e4125f69682e042e9fe5ec8')
sha256sums_x86_64=('34363ff2b3fda9b980092060fa080cd0e84671c4f7a0f79827b10f148ddb4b53')

package() {

    MACHINE_TYPE=`uname -m`
    if [ ${MACHINE_TYPE} == 'x86_64' ]; then
        arch_flag=64bit
    else
        arch_flag=32bit
    fi

    cd "$srcdir"
    sh $pkgname-$pkgver.sh -e `pwd`

    cd "$srcdir"/COPASI-$pkgver-Linux-$arch_flag
    rm share/copasi/lib/libfreetype.so.6
    ln -s /usr/lib/libfreetype.so share/copasi/lib/
    ln -s /usr/lib/libfreetype.so.6 share/copasi/lib/
    
    # install program files
    install -d "$pkgdir"/usr/{bin,share}
    install -m755 bin/* "$pkgdir"/usr/bin
    cp -R share/copasi "$pkgdir"/usr/share/
    
    # desktop integration...
    cd "$srcdir"/copasi-desktop
    install -Dm755 copasi.sh "$pkgdir/etc/profile.d/copasi.sh"
    install -Dm644 copasi.desktop "$pkgdir/usr/share/applications/copasi.desktop"
    install -Dm644 copasi.xml "$pkgdir/usr/share/mime/packages/copasi.xml"
    install -d "$pkgdir/usr/share/icons/hicolor"
    cp -R icons/* "$pkgdir/usr/share/icons/hicolor/"
    # copasi starts CopasiUI after setting COPASIDIR environment variable
    # useful for launching COPASI using the menu entry
    install -Dm755 copasi "$pkgdir/usr/bin/copasi"

}