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# Maintainer: Bipin Kumar <bipin@ccmb.res.in>
# shellcheck disable=2034
# shellcheck disable=2148
pkgname=diamond
pkgver=2.1.3
pkgrel=1
pkgdesc="High performance sequence aligner for protein and translated DNA searches with big sequence data. https://doi.org/10.1038/s41592-021-01101-x"
arch=('x86_64')
url="https://github.com/bbuchfink/diamond"
license=('GPL3')
depends=('gcc-libs' 'zlib' 'zstd' 'blast+')
makedepends=('cmake')
source=("$pkgname-$pkgver.tar.gz::https://github.com/bbuchfink/diamond/archive/v$pkgver.tar.gz")
sha256sums=('6c5504d33e9c88314d9033c3b5e083a572ac550372f70afdae5c56213e2bea85')
build() {
cd $pkgname-$pkgver
cmake -B build \
-DCMAKE_INSTALL_PREFIX=/usr \
-DCMAKE_BUILD_TYPE=Release \
-DWITH_ZSTD=ON \
-DBLAST_INCLUDE_DIR=/usr/include/ncbi-tools++ \
-DBLAST_LIBRARY_DIR=/usr/lib/ \
-DZSTD_LIBRARY=/usr/lib/libzstd.so \
-DZLIB_INCLUDE_DIR=/usr/include \
-Wno-dev
cmake --build build
}
package() {
cd $pkgname-$pkgver
DESTDIR="$pkgdir" cmake --install build
}
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