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# Maintainer: Lucas Werkmeister <mail@lucaswerkmeister.de>
java_=8
pkgname_=fastr
pkgname="${pkgname_}-jdk${java_}-bin"
pkgver=19.3.1
pkgrel=1
pkgdesc="GraalVM-based, high-performance implementation of the R language (Java ${java_} version)"
arch=('x86_64')
url='https://github.com/oracle/fastr'
license=('GPL3')
depends=("jdk${java_}-graalvm-bin"
'gcc-libs' # for libgomp.so.1 and others
'gcc6-libs' # for libgfortran.so.3 (gcc-libs has .so.5)
'sed') # for Rscript fix; TODO remove once no longer needed
source=("https://github.com/oracle/$pkgname_/releases/download/vm-${pkgver}/r-installable-java${java_}-linux-amd64-${pkgver}.jar")
sha256sums=('bcf577acc66082d4a9441ed3bb5a4541204db00195814637575c33c11a207453')
package() {
local file eq permissions mode name target
mkdir -p "$pkgdir/usr/lib/jvm/java-${java_}-graalvm/"
cp -a -t "$pkgdir/usr/lib/jvm/java-${java_}-graalvm/" jre/ LICENSE_FASTR 3rd_party_licenses_fastr.txt
printf '\n' >> META-INF/permissions
while read -r file eq permissions; do
if [[ $eq != '=' ]]; then
printf >&2 'second word should be "=": %s %s %s\n' "$file" "$eq" "$permissions"
return 1
fi
case $permissions in
'rw-------') mode=600;;
'rw-r--r--') mode=644;;
'rw-rw-r--') mode=664;;
'rwxr--r--') mode=744;; # oracle/fastr#119
'rwxr-xr-x') mode=755;;
'rwxrwxr-x') mode=775;;
'rwxrwxrwx') continue;; # symbolic link
*)
printf >&2 'unknown permissions: %s\n' "$permissions"
return 1
;;
esac
chmod "$mode" -- "$pkgdir/usr/lib/jvm/java-${java_}-graalvm/$file"
done < META-INF/permissions
printf '\n' >> META-INF/symlinks
while read -r name eq target; do
if [[ $eq != '=' ]]; then
printf >&2 'second word should be "=": %s %s %s\n' "$name" "$eq" "$target"
return 1
fi
mkdir -p -- "$pkgdir/usr/lib/jvm/java-${java_}-graalvm/$(dirname -- "$name")"
ln -s -- "$target" "$pkgdir/usr/lib/jvm/java-${java_}-graalvm/$name"
done < META-INF/symlinks
ln -s -- '/usr/lib/gcc/x86_64-pc-linux-gnu/6.5.0/libgfortran.so.3' "$pkgdir/usr/lib/jvm/java-${java_}-graalvm/jre/languages/R/lib/libgfortran.so.3"
install -DTm644 LICENSE_FASTR "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
sed -i "/^exec/ i\\
# added by AUR package, hopefully temporarily\\
export LD_LIBRARY_PATH=/usr/lib/jvm/java-${java_}-graalvm/jre/languages/R/lib\${LD_LIBRARY_PATH:+:\$LD_LIBRARY_PATH}\\
" "$pkgdir/usr/lib/jvm/java-${java_}-graalvm/jre/languages/R/bin/Rscript"
}
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