blob: d4265929757f9b084090b03c71fab6ead090f197 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
|
# Maintainer: Andrew O'Neill <andrew at meanjollies dot com>
# Contributor: Christopher Vittal ("viralstitch") <chris@vittal.dev>
pkgname=htslib
pkgver=1.14
pkgrel=1
pkgdesc='A C library for high-throughput sequencing data formats'
arch=('x86_64')
url="https://github.com/samtools/${pkgname}"
license=('custom')
depends=('bzip2' 'curl' 'xz')
provides=('tabix')
replaces=('tabix')
conflicts=('tabix')
source=("${pkgname}-${pkgver}.tar.bz2::${url}/releases/download/${pkgver}/${pkgname}-${pkgver}.tar.bz2")
sha256sums=('ed221b8f52f4812f810eebe0cc56cd8355a5c9d21c62d142ac05ad0da147935f')
build() {
cd "${pkgname}-${pkgver}"
./configure \
--prefix=/usr \
--enable-libcurl \
--enable-plugins \
--with-plugin-dir=/usr/lib/htslib/plugins
make
}
check() {
cd "${pkgname}-${pkgver}"
make check
}
package() {
cd "${pkgname}-${pkgver}"
make DESTDIR=${pkgdir} install
install -Dm644 LICENSE "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE"
# htslib shared library comes installed as 0644
chmod +x ${pkgdir}/usr/lib/libhts.so.*.*
}
|