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# Maintainer: Chocobo1 <chocobo1 AT archlinux DOT net>
pkgname=htslib-git
pkgver=1.17.r16.g93434e04
pkgrel=1
pkgdesc="C library for high-throughput sequencing data formats"
arch=('i686' 'x86_64')
url="https://github.com/samtools/htslib"
license=('custom')
depends=('glibc' 'bzip2' 'curl' 'openssl' 'xz')
makedepends=('git')
provides=("htslib=$pkgver")
conflicts=('htslib')
options=('staticlibs')
source=("git+https://github.com/samtools/htslib.git")
sha256sums=('SKIP')
prepare() {
cd "htslib"
git submodule update --init --recursive
}
pkgver() {
cd "htslib"
git describe --long --tags | sed 's/^v//;s/\([^-]*-g\)/r\1/;s/-/./g'
}
build() {
cd "htslib"
autoreconf -fi
./configure \
--prefix="/usr" \
--enable-plugins \
--with-plugin-dir="/usr/lib/htslib/plugins" \
--enable-gcs \
--enable-s3
make
}
check() {
cd "htslib"
#make check
}
package() {
cd "htslib"
make DESTDIR="$pkgdir" install
install -Dm644 "LICENSE" -t "$pkgdir/usr/share/licenses/htslib"
}
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