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# Maintainer: Andrew O'Neill <andrew at meanjollies dot com>
# Contributor: Christian Krause ("wookietreiber") <christian.krause@mailbox.org>
pkgname=mothur
pkgver=1.40.1
pkgrel=1
pkgdesc="A bioinformatics program for analyzing microbial communities"
arch=('i686' 'x86_64')
url="https://www.mothur.org/"
license=('GPL3')
depends=('boost-libs')
makedepends=('boost')
source=(https://github.com/$pkgname/$pkgname/archive/v$pkgver.tar.gz)
sha256sums=('7b1561fbd1ca0316228535553ec5e884eb671b3c320b8c6fce898c2d6632dc64')
prepare() {
cd $pkgname-$pkgver
sed -e 's|BOOST_LIBRARY_DIR="\\"Enter_your_boost_library_path_here\\""|BOOST_LIBRARY_DIR = /usr/lib|' \
-e 's|BOOST_INCLUDE_DIR="\\"Enter_your_boost_include_path_here\\""|BOOST_INCLUDE_DIR = /usr/include|' \
-i Makefile
}
build() {
cd $pkgname-$pkgver
make
}
package() {
cd $pkgname-$pkgver
install -Dm755 mothur $pkgdir/usr/bin/mothur
install -Dm755 uchime $pkgdir/usr/bin/uchime
}
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