PKGBUILD


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# Maintainer: Lev Levitsky <levlev@mail.ru>
pkgbase='percolator-bin'
pkgname=('percolator' 'percolator-converters')
pkgver=3.08
pkgrel=1
epoch=
pkgdesc="Software for postprocessing of shotgun proteomics data + format converters + Elude tool"
arch=('x86_64')
url="http://percolator.ms/"
license=('Apache')
depends=('gcc-libs' 'tokyocabinet' 'eigen')
provides=("${pkgname%-bin}")
conflicts=("${pkgname%-bin}-git")
_trunc_ver=${pkgver%.*}
source=("percolator-v${pkgver}-linux-amd64.deb::https://github.com/percolator/percolator/releases/download/rel-${pkgver//./-}/percolator-v${pkgver//./-}-linux-amd64.deb"
    "percolator-converters-v${pkgver}-linux-amd64.deb::https://github.com/percolator/percolator/releases/download/rel-${pkgver//./-}/percolator-converters-v${pkgver//./-}-linux-amd64.deb")
sha256sums=('14320b7cea5062b83968c29fa779ccc421a5836012ffb3dfd8274e13a2dd5f7e'
            '4cf18292f1328fcc41c241ace84086681f048078bf90faefa8f8b78992ab1d6c')
package_percolator() {
	pkgdesc="Percolator and qvality, two post processors for shotgun proteomics data."
	provides=("${pkgname[0]}")
	conflicts=("${pkgname[0]}")
	ar x "${srcdir}/${pkgname[0]}-v${pkgver}-linux-amd64.deb"
	tar -xzf "${srcdir}/data.tar.gz" -C "$pkgdir" --exclude usr/bin/gtest_unit --exclude usr/share/eigen3/* --exclude usr/include/eigen3/*
}

package_percolator-converters() {
	pkgdesc="Parsers of different database search engines to percolator input format."
	provides=("${pkgname[1]}")
	conflicts=("${pkgname[1]}")
	ar x "${srcdir}/${pkgname[1]}-v${pkgver}-linux-amd64.deb"
	tar -xzf "${srcdir}/data.tar.gz" -C "$pkgdir"
}