blob: 7195e1bccdaf8dbe19b65be207a52026da52fd51 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
|
# Maintainer: Myles English <myles at rockhead dot biz>
pkgname=petsc
pkgver=3.6.0
pkgrel=1
_config=arch-linux2-cxx-opt
# if --with-debugging=yes is set then PETSC_ARCH is automatically set to
#"arch-linux2-cxx-debug" for some things, so the _config should be changed too
#_config=arch-linux2-cxx-debug
pkgdesc="Portable, extensible toolkit for scientific computation"
arch=('i686' 'x86_64')
url="http://www.mcs.anl.gov/petsc/petsc-as"
license=('MIT compatible')
options=(staticlibs)
depends=('python2' 'openmpi' 'boost' 'lapack')
makedepends=('gcc' 'gcc-fortran' 'cmake')
install=petsc.install
source=(http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${pkgname}-${pkgver/_/-}.tar.gz)
md5sums=('f0dcbf25a8dd7f3069c1f094338c5263')
_install_dir=/opt/petsc/${_config}
# to avoid: "make[2]: *** No rule to make target `libptesmumps.a', needed by `main_esmumps'. Stop."
export MAKEFLAGS="-j1"
build() {
_build_dir="${srcdir}/${pkgname}-${pkgver/_/-}"
cd ${_build_dir}
#patch -Np1 -i ${startdir}/patch_debug.diff
unset PETSC_ARCH
export PETSC_DIR=${_build_dir}
find ${srcdir} -name "*" -type f -exec \
sed -i 's#\(/usr/bin/env \|/usr/bin/\)python[2-3]*#\1python2#' {} \;
CONFOPTS="--with-shared-libraries=1 --with-clanguage=C++ --COPTFLAGS=-O2 --CXXOPTFLAGS=-O2"
# External downloads
for external_pkg in ptscotch scalapack metis parmetis superlu mumps pastix hypre suitesparse; do
CONFOPTS="${CONFOPTS} --download-${external_pkg}=yes"
done
if [ "${TRILINOS_DIR}" ]; then
CONFOPTS="${CONFOPTS} --with-ml=1 --with-ml-lib=${TRILINOS_DIR}/lib/libml.so --with-ml-include=${TRILINOS_DIR}/include"
fi
# Arch specific
CONFOPTS="${CONFOPTS} --with-boost=1 --with-boost-dir=/usr"
# to enable use of type()
CONFOPTS="${CONFOPTS} --with-fortran-datatypes --FOPTFLAGS=-O2"
python2 ./configure --prefix=${_install_dir} ${CONFOPTS}
make
}
package() {
_build_dir="${srcdir}/${pkgname}-${pkgver/_/-}"
cd ${_build_dir}
export PETSC_DIR=${_build_dir}
make install DESTDIR=${pkgdir}${_install_dir} # > /dev/null
sed -i 's#'"${pkgdir}"'##g' "${pkgdir}${_install_dir}/lib/pkgconfig/PETSc.pc"
sed -i 's#'"${pkgdir}"'##g' "${pkgdir}${_install_dir}/conf/variables"
sed -i 's#'"${pkgdir}"'##g' "${pkgdir}${_install_dir}/conf/petscvariables"
sed -i 's#'"${pkgdir}"'##g' "${pkgdir}${_install_dir}/conf/rules"
sed -i 's#'"${pkgdir}"'##g' "${pkgdir}${_install_dir}/include/petscconf.h"
sed -i 's#'"${pkgdir}"'##g' "${pkgdir}${_install_dir}/include/petscconfiginfo.h"
sed -i 's#'"${pkgdir}"'##g' "${pkgdir}${_install_dir}/conf/petscrules"
export PETSC_DIR=${_install_dir}
# Note: the hyperlinks between documentation, tutorials and examples are
# not perfect yet
# documentation
mkdir -p ${pkgdir}/usr/share/doc/$pkgname/
cp -r ${_build_dir}/docs ${pkgdir}/usr/share/doc/$pkgname/
# tutorials
cp -r ${_build_dir}/tutorials ${pkgdir}/usr/share/doc/$pkgname/
# src for tutorials
cp -r ${_build_dir}/src ${pkgdir}/usr/share/doc/$pkgname/
# html versions of header files
mkdir -p ${pkgdir}/usr/share/doc/$pkgname/include
cp -r ${_build_dir}/include/*.html ${pkgdir}/usr/share/doc/$pkgname/include/
# install licenCe (even though there is no such word as licenSes)
mkdir -p ${pkgdir}/usr/share/licenses/petsc
cp ${_build_dir}/docs/copyright.html ${pkgdir}/usr/share/licenses/$pkgname/
mkdir -p ${pkgdir}/etc/profile.d
echo "export PETSC_DIR=${_install_dir}" > ${pkgdir}/etc/profile.d/petsc.sh
chmod +x ${pkgdir}/etc/profile.d/petsc.sh
# show where the shared libraries are
install -d -m755 "${pkgdir}"/etc/ld.so.conf.d/
echo "${_install_dir}/lib" > "${pkgdir}"/etc/ld.so.conf.d/petsc.conf
}
|