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# Maintainer: Astro Benzene <universebenzene at sina dot com>
pkgbase=python-drizzlepac
_pyname=${pkgbase#python-}
pkgname=("python-${_pyname}")
#"python-${_pyname}-doc")
pkgver=3.9.0
pkgrel=1
pkgdesc="AstroDrizzle for HST images"
arch=('i686' 'x86_64')
url="http://www.stsci.edu/scientific-community/software/drizzlepac.html"
license=('BSD-3-Clause')
makedepends=('python-setuptools-scm>=3.4'
'python-build'
'python-installer'
'python-astropy>=5.0.4') # wheel required by new setuptools
# 'python-markupsafe'
# 'python-relic'
# 'python-numpydoc'
# 'python-sphinx_rtd_theme'
# 'python-stsci_rtd_theme'
# 'python-stsci.tools'
# 'python-stsci.convolve'
# 'python-stsci.image'
# 'python-stsci.imagestats'
# 'python-stsci.imagemanip'
# 'python-stsci.ndimage'
# 'python-stsci.skypac'
# 'python-stsci.stimage'
# 'python-stwcs'
# 'python-stregion'
# 'python-fitsblender'
# 'python-nictools')
checkdepends=('python-pytest'
'python-matplotlib'
'python-scikit-learn'
'python-scikit-image'
'python-spherical_geometry'
'python-stwcs'
'python-stsci.skypac'
'python-ci_watson'
'python-fitsblender'
'python-stsci.image'
'python-stregion'
'python-tweakwcs'
'python-astroquery'
'python-photutils'
'python-bokeh'
'python-pypdf2'
'python-simplify-polyline')
# 'python-pytest-remotedata'
## 'python-nictools'
# 'python-pandas'
# 'python-crds'
source=("https://files.pythonhosted.org/packages/source/${_pyname:0:1}/${_pyname}/${_pyname}-${pkgver}.tar.gz"
"https://raw.githubusercontent.com/spacetelescope/drizzlepac/master/tests/hap/ACSWFC3ListDefault50.csv")
md5sums=('8259a7c4b5bd200cd82cbcb3841b0812'
'acaf7d8bcf0f6244042bba0df3d03679')
get_pyinfo() {
[[ $1 == "site" ]] && python -c "import site; print(site.getsitepackages()[0])" || \
python -c "import sys; print('$1'.join(map(str, sys.version_info[:2])))"
}
#prepare() {
# cd ${srcdir}/${_pyname}-${pkgver}
#
# sed -i -e "/markupsafe/s/<=2.0.1//" pyproject.toml
#}
build() {
cd ${srcdir}/${_pyname}-${pkgver}
python -m build --wheel --no-isolation --skip-dependency-check
# msg "Building Docs"
# python setup.py build_sphinx
}
check() {
cd ${srcdir}/${_pyname}-${pkgver}
# ln -rs ${srcdir}/ACSWFC3ListDefault50.csv "build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap"
# skip some tests that need lots of online data or cost lots of time; some files are missing in pypi package
pytest "build/lib.linux-${CARCH}-cpython-$(get_pyinfo)" \
--deselect=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_pipeline.py::TestSingleton::test_astrometric_singleton[iaaua1n4q] \
--ignore=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_svm_canary.py \
--ignore=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_svm_hrcsbc.py \
--ignore=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_svm_ibqk07.py \
--ignore=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_svm_ibyt50.py \
--ignore=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_svm_j97e06.py \
--ignore=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_svm_je281u.py \
--ignore=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_svm_wfc3ir.py || warning "Tests failed" # -vv -l -ra --color=yes -o console_output_style=count
# --deselect=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_pipeline.py::TestSingleton::test_astrometric_singleton[iaaua1n4q] \
# --ignore=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_run_svmpoller.py \
# --deselect=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_pipeline.py::TestSingleton::test_astrometric_singleton[iaaua1n4q] \
# --deselect=build/lib.linux-${CARCH}-cpython-$(get_pyinfo)/tests/hap/test_pipeline.py::TestSingleton::test_astrometric_singleton[iacs01t4q] || warning "Tests failed" # -vv --color=yes
}
package_python-drizzlepac() {
depends=('python>=3.10'
'python-scipy'
'python-matplotlib'
'python-requests'
'python-scikit-learn>=0.20'
'python-stsci.tools>=4.0'
'python-stsci.image>=2.3.7'
'python-stsci.imagestats>=1.8.2'
'python-stsci.skypac>=1.0.9'
'python-stsci.stimage'
'python-stwcs>=1.5.3'
'python-tweakwcs>=0.8.7'
'python-stregion>=1.1.7'
'python-fitsblender>=0.4.2'
'python-bokeh'
'python-pandas'
'python-spherical_geometry>=1.2.22'
'python-astroquery>=0.4'
'python-astrocut'
'python-photutils>=1.10.0'
'python-lxml'
'python-pypdf2'
'python-scikit-image>=0.14.2'
# 'python-pytables'
# 'python-typing_extensions>4'
'python-simplify-polyline')
# 'python-markupsafe')
# 'python-acstools'
# 'python-nictools')
optdepends=('python-yaml: HAP-pipeline specific'
'python-pysynphot'
'python-drizzlepac-doc: Documentation for DrizzlePac')
cd ${srcdir}/${_pyname}-${pkgver}
install -D -m644 -t "${pkgdir}/usr/share/licenses/${pkgname}" LICENSE.txt
install -D -m644 -t "${pkgdir}/usr/share/doc/${pkgname}" README.md
python -m installer --destdir="${pkgdir}" dist/*.whl
rm -r ${pkgdir}/$(get_pyinfo site)/{doc,src,tests}
# rm "${pkgdir}/usr/lib/python$(get_pyver)/site-packages/tests/__init__.py"
# rm "${pkgdir}/usr/lib/python$(get_pyver)/site-packages/tests/__pycache__"/__init__*
}
#package_python-drizzlepac-doc() {
# pkgdesc="Documentation for DrizzlePac"
# cd ${srcdir}/${_pyname}-${pkgver}/build/sphinx
#
# install -d -m755 "${pkgdir}/usr/share/doc/${pkgbase}"
# cp -a html "${pkgdir}/usr/share/doc/${pkgbase}"
#}
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