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# Maintainer: Clint Valentine <valentine.clint@gmail.com>
pkgname='python-gffutils'
pkgver=0.9
pkgrel=1
pkgdesc="GFF and GTF file manipulation and interconversion"
arch=('any')
url="https://github.com/daler/gffutils"
license=('MIT')
depends=(
'python'
'python-argcomplete'
'python-argh'
'python-pyfaidx'
'python-simplejson'
'python-six')
optdepends=(
'python-biopython: for sequence manipulation'
'bedtools: for genomic interval arithemtic'
'python-pybedtools: wrapper for bedtools')
makedepends=('python-setuptools')
ptions=(!emptydirs)
source=("https://github.com/daler/gffutils/archive/v${pkgver}.tar.gz")
md5sums=('819e44d2995175d6b0e575ecf07fc50f')
package() {
cd "${srcdir}/gffutils-${pkgver}"
python setup.py install --root="${pkgdir}/" --optimize=1
}
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