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# Maintainer: bipin kumar <kbipinkumar@pm.me>
pkgname=python-ncls
_module=${pkgname#python-}
pkgver=0.0.68
pkgrel=2
pkgdesc="A wrapper for the nested containment list data structure. http://dx.doi.org/10.1093/bioinformatics/btz615"
arch=('x86_64')
url="https://github.com/biocore-ntnu/ncls"
license=('BSD-2')
depends=(
'python'
'python-numpy'
'glibc'
'python-setuptools'
)
makedepends=(
'python-setuptools-scm'
'cython'
'python-build'
'python-installer'
'python-wheel'
)
options=(!emptydirs)
source=("https://files.pythonhosted.org/packages/source/${_module::1}/$_module/$_module-$pkgver.tar.gz"
"LICENSE"
"cython3.patch")
sha256sums=('81aaa5abb123bb21797ed2f8ef921e20222db14a3ecbc61ccf447532f2b7ba93'
'48186409eb1721726d28884f40346a8380a893e95a50bef75584e2e9c2d4fcd5'
'80fbdf0c5c2a805c953df3c359d84e63bc801d14457ad5b8a6c140250ccec7d2')
prepare() {
cp LICENSE "$_module-$pkgver"
cp cython3.patch "$_module-$pkgver"
rm "$_module-$pkgver"/ncls/src/{fncls.c,ncls.c,ncls32.c}
# Set cython language_level to 3
cd "$_module-$pkgver"
patch -p1 < cython3.patch
}
build() {
cd "$_module-$pkgver"
python -m build --wheel --no-isolation
}
package() {
cd "$_module-$pkgver"
python -m installer --destdir="$pkgdir" dist/*.whl
install -Dm644 LICENSE "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE"
}
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