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# Maintainer: Clint Valentine <valentine.clint@gmail.com>
_name=PyVCF
pkgbase='python-pyvcf'
pkgname=('python-pyvcf' 'python2-pyvcf')
pkgver=0.6.8
pkgrel=2
pkgdesc="A Variant Call Format reader for Python"
arch=('any')
url=https://pypi.python.org/pypi/"${_name}"
license=('custom:population-genetics-technologies')
makedepends=(
'python' 'python-setuptools' 'cython'
'python2' 'python2-setuptools' 'cython2')
options=(!emptydirs)
source=(
https://raw.githubusercontent.com/jamescasbon/PyVCF/476169cd457ba0caa6b998b301a4d91e975251d9/LICENSE
"${pkgname}"-"${pkgver}".tar.gz::https://pypi.python.org/packages/20/b6/36bfb1760f6983788d916096193fc14c83cce512c7787c93380e09458c09/PyVCF-0.6.8.tar.gz
)
sha256sums=(
'f4a2bc89af6b660958705e9f5e47ed5ebf31690101b121b9016b807ee1967e6a'
'e9d872513d179d229ab61da47a33f42726e9613784d1cb2bac3f8e2642f6f9d9'
)
prepare() {
cp -a "${_name}"-"${pkgver}"{,-py2}
}
build(){
cd "${srcdir}"/"${_name}"-"${pkgver}"
python setup.py build
cd "${srcdir}"/"${_name}"-"${pkgver}"-py2
python2 setup.py build
}
package_python2-pyvcf() {
depends=('python2')
install -Dm644 LICENSE "${pkgdir}"/usr/share/licenses/"${pkgname}"/LICENSE
cd "${_name}"-"${pkgver}"-py2
python2 setup.py install --root="${pkgdir}"/ --optimize=1 --skip-build
mv "${pkgdir}"/usr/bin/vcf_melt "${pkgdir}"/usr/bin/vcf_melt2
for script in "${pkgdir}"/usr/bin/*.py; do
mv "${script}" "${pkgdir}"/usr/bin/$(basename "${script%.py}2.py")
done
}
package_python-pyvcf() {
depends=('python')
install -Dm644 LICENSE "${pkgdir}"/usr/share/licenses/"${pkgname}"/LICENSE
cd "${_name}"-"${pkgver}"
python setup.py install --root="${pkgdir}"/ --optimize=1 --skip-build
}
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