blob: 2b7f231882ccc540751dae2e18903482ad4b329d (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
|
# system requirements: pandoc (>= 1.19.2.1)
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=abseqR
_pkgver=1.22.0
pkgname=r-${_pkgname,,}
pkgver=1.22.0
pkgrel=1
pkgdesc='Reporting and data analysis functionalities for Rep-Seq datasets of antibody libraries'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocparallel
r-biocstyle
r-circlize
r-flexdashboard
r-ggcorrplot
r-ggdendro
r-ggplot2
r-gridextra
r-knitr
r-plotly
r-plyr
r-png
r-rcolorbrewer
r-reshape2
r-rmarkdown
r-stringr
r-vegan
r-venndiagram
pandoc
)
optdepends=(
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('0290f4780ba762aa59aea09a94c301e7ec9d175d5240ef8d05667ec4089c432a')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|