blob: c09f3e5841fd524a70f29310e1a90245ab7f558e (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=ballgown
_pkgver=2.34.0
pkgname=r-${_pkgname,,}
pkgver=2.34.0
pkgrel=1
pkgdesc='Flexible, isoform-level differential expression analysis'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-biobase
r-genomeinfodb
r-genomicranges
r-iranges
r-limma
r-rcolorbrewer
r-rtracklayer
r-s4vectors
r-sva
)
optdepends=(
r-knitr
r-markdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('658426a92661774c79ea1c80ab8a378682cf0c0c9a8acdb83e17fe93bcf978e4')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|