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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=bcSeq
_pkgver=1.32.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Fast Sequence Mapping in High-Throughput shRNA and CRISPR Screens"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-or-later')
depends=(
r-biostrings
r-rcpp
)
optdepends=(
r-knitr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('c894c15874b09f4edb211b7d32498057')
b2sums=('8010321f1fecded18e5b0ee519bb7e2ec27d44d0691816dab728b09500edec4eb722d5ac2376c6a1470fe763eaf9bb0a2f0d458a346e87bf94d65c03f82e6408')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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