blob: 88a2cc1134507f60a87a1d952a4cca3569b14c87 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=beachmat
_pkgver=2.24.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Compiling Bioconductor to Handle Each Matrix Type"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-biocgenerics
r-delayedarray
r-rcpp
r-sparsearray
)
makedepends=(
r-assorthead
)
optdepends=(
r-beachmat.hdf5
r-biocparallel
r-biocstyle
r-hdf5array
r-knitr
r-rcmdcheck
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('98b3072a971c483aae544702f84b45a3')
b2sums=('a0045fac674bbadae020323ea7493d91cf67fec480fe9790fe1004fc255d11bf68b7b9a359eed878f92b351cb8e1d51af53aa54229b717c3b9f35a80fe90ab48')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
|