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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=CATALYST
_pkgver=1.30.2
pkgname=r-${_pkgname,,}
pkgver=1.30.2
pkgrel=1
pkgdesc='Cytometry dATa anALYSis Tools'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-circlize
r-complexheatmap
r-consensusclusterplus
r-cowplot
r-data.table
r-dplyr
r-drc
r-flowcore
r-flowsom
r-ggplot2
r-ggrepel
r-ggridges
r-gridextra
r-matrixstats
r-nnls
r-purrr
r-rcolorbrewer
r-reshape2
r-rtsne
r-s4vectors
r-scales
r-scater
r-singlecellexperiment
r-summarizedexperiment
)
optdepends=(
r-biocstyle
r-diffcyt
r-flowworkspace
r-ggcyto
r-knitr
r-opencyto
r-rmarkdown
r-testthat
r-uwot
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('0498139efce4703dff5bb72ebb6c2f9fe97a142192c07ab81a64931a7e70d944')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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