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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=ccfindR
_pkgver=1.18.0
pkgname=r-${_pkgname,,}
pkgver=1.18.0
pkgrel=1
pkgdesc='Cancer Clone Finder'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
gsl
r
r-ape
r-gtools
r-irlba
r-rcolorbrewer
r-rcpp
r-rcppeigen
r-rdpack
r-rmpi
r-rtsne
r-s4vectors
r-singlecellexperiment
r-summarizedexperiment
)
optdepends=(
r-biocstyle
r-knitr
r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('3a65d4820dce97eb5c9522b4922084000bae3492714d8a2b4c7824857fa9dd6a')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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