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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=cytomapper
_pkgver=1.18.0
pkgname=r-${_pkgname,,}
pkgver=1.18.0
pkgrel=1
pkgdesc='Visualization of highly multiplexed imaging data in R'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocparallel
r-delayedarray
r-ebimage
r-ggbeeswarm
r-ggplot2
r-hdf5array
r-matrixstats
r-nnls
r-raster
r-rcolorbrewer
r-rhdf5
r-s4vectors
r-shiny
r-shinydashboard
r-singlecellexperiment
r-spatialexperiment
r-summarizedexperiment
r-svglite
r-svgpanzoom
r-viridis
)
optdepends=(
r-biocstyle
r-cowplot
r-knitr
r-markdown
r-rmarkdown
r-shinytest
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('08788924466eb0b2c5490e7a8c52370c3a6f4fdf825aeb754a6a1053d5944d79')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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