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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=dearseq
_pkgver=1.12.1
pkgname=r-${_pkgname,,}
pkgver=1.12.1
pkgrel=1
pkgdesc='Differential Expression Analysis for RNA-seq data through a robust variance component test'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-compquadform
r-dplyr
r-ggplot2
r-magrittr
r-matrixstats
r-patchwork
r-pbapply
r-reshape2
r-rlang
r-scattermore
r-statmod
r-survey
r-tibble
r-viridislite
)
optdepends=(
r-biobase
r-biocmanager
r-biocset
r-covr
r-deseq2
r-edger
r-geoquery
r-gsa
r-knitr
r-limma
r-readxl
r-rmarkdown
r-s4vectors
r-summarizedexperiment
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('ef98cd86986374d15bab59a237fd8ae9b46be6a492cf4a870a4f8984860b8d8a')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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