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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=DEGreport
_pkgver=1.34.0
pkgname=r-${_pkgname,,}
pkgver=1.34.0
pkgrel=1
pkgdesc='Report of DEG analysis'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-biobase
r-biocgenerics
r-broom
r-circlize
r-complexheatmap
r-consensusclusterplus
r-cowplot
r-deseq2
r-dplyr
r-edger
r-ggdendro
r-ggplot2
r-ggrepel
r-knitr
r-lasso2
r-logging
r-magrittr
r-nozzle.r1
r-psych
r-rcolorbrewer
r-reshape
r-rlang
r-s4vectors
r-scales
r-stringr
r-summarizedexperiment
r-tibble
r-tidyr
)
optdepends=(
r-annotationdbi
r-biocstyle
r-limma
r-pheatmap
r-rmarkdown
r-statmod
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('cce02adbd1087718a0a00b55399b5401e7ab1ca8428a1ef7bd3a591b5583e544')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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