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# Maintainer: peippo <christoph+aur@christophfink.com>
# Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com
# Contributor: Grey Christoforo <first name at last name dot net>
_bcname=DelayedArray
_bcver=0.28.0
pkgname=r-${_bcname,,}
pkgdesc="A unified framework for working transparently with on-disk and in-memory array-like datasets"
url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
pkgver=${_bcver//[:-]/.}
pkgrel=1
arch=("i686" "x86_64")
license=("Artistic2.0")
depends=(
"r>=4.0.0"
"r-biocgenerics>=0.43.4"
"r-iranges>=2.17.3"
"r-matrixgenerics>=1.1.3"
"r-s4arrays>=1.1.1"
"r-s4vectors>=0.27.2"
"r-sparsearray>=1.1.10"
)
optdepends=(
"r-airway"
"r-biocparallel"
"r-biocstyle"
"r-delayedmatrixstats"
"r-genefilter"
"r-hdf5array>=1.17.12"
"r-knitr"
"r-lobstr"
"r-rmarkdown"
"r-runit"
"r-summarizedexperiment"
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
b2sums=('09f14849b69bb27be6e3a99f9e466ecb65b70f6de2732c70a6b18ed24d6f9f6366b17e0131b0a1af91b9069c86671fcfdd4590940880a78fe6ff68ef333b15ec')
build() {
R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_bcname}" "${pkgdir}/usr/lib/R/library"
if [[ -f "${_bcname}/LICENSE" ]]; then
install -Dm0644 "${_bcname}/LICENSE" "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE"
fi
}
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