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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=EBSeq
_pkgver=2.8.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="An R package for gene and isoform differential expression analysis of RNA-seq data"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-blockmodeling
r-gplots
r-rcpp
r-rcppeigen
r-testthat
r-bh
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('bd6ab24167f208a3add4691a34c01cb6')
b2sums=('ec0417ab70f41ecd93cb0a8086803e349a3c905d16b59b654ec3de807ec9cb991d45960263963a6be817eae0fdde3922c977b3c31c41266d5a25a5a239355e1f')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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