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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=EWCE
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=1.12.0
pkgrel=1
pkgdesc='Expression Weighted Celltype Enrichment'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-biocparallel
r-data.table
r-delayedarray
r-dplyr
r-ewcedata
r-ggplot2
r-hgnchelper
r-limma
r-orthogene
r-reshape2
r-rnomni
r-singlecellexperiment
r-stringr
r-summarizedexperiment
)
optdepends=(
r-biocstyle
r-delayedmatrixstats
r-deseq2
r-ggdendro
r-knitr
r-markdown
r-mast
r-memoise
r-patchwork
r-readxl
r-remotes
r-rmarkdown
r-rworkflows
r-scales
r-sctransform
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('545bdcfe6da5f2a4ecbf6662257d9fd46f9ce8bba4269f498191cd74025d41a6')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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