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# system requirements: GNU make, C++11
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=flowCore
_pkgver=2.12.0
pkgname=r-${_pkgname,,}
pkgver=2.12.0
pkgrel=1
pkgdesc='flowCore: Basic structures for flow cytometry data'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
gcc
make
r
r-bh
r-biobase
r-biocgenerics
r-cpp11
r-cytolib
r-matrixstats
r-rcpp
r-rprotobuflib
r-s4vectors
)
optdepends=(
r-flowstats
r-flowviz
r-flowworkspace
r-flowworkspacedata
r-ggcyto
r-gridextra
r-knitr
r-opencyto
r-rgraphviz
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('0df169a8a21326bd0b85441094283d78b19461e3ba22984993e06dc3b8257bfe')
options=(!lto !buildflags staticlibs)
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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