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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=FlowSOM
_pkgver=2.6.0
pkgname=r-${_pkgname,,}
pkgver=2.6.0
pkgrel=1
pkgdesc='Using self-organizing maps for visualization and interpretation of cytometry data'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocgenerics
r-colorramps
r-consensusclusterplus
r-cytoml
r-dplyr
r-flowcore
r-flowworkspace
r-ggforce
r-ggnewscale
r-ggplot2
r-ggpointdensity
r-ggpubr
r-ggrepel
r-igraph
r-magrittr
r-pheatmap
r-rcolorbrewer
r-rlang
r-rtsne
r-scattermore
r-tidyr
r-xml
)
optdepends=(
r-biocstyle
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('2cfcb3ca83f0c35eceb753b551eb5fc8b5022dfceeeefa017eb11406218dfde8')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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