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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=HDF5Array
_pkgver=1.34.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="HDF5 datasets as array-like objects in R"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
curl
openssl
r-biocgenerics
r-delayedarray
r-iranges
r-rhdf5
r-rhdf5filters
r-s4arrays
r-s4vectors
r-sparsearray
zlib
)
makedepends=(
r-rhdf5lib
)
optdepends=(
r-biocparallel
r-delayedmatrixstats
r-experimenthub
r-genefilter
r-genomicfeatures
r-genomicranges
r-h5vcdata
r-runit
r-singlecellexperiment
r-summarizedexperiment
r-tenxbraindata
r-zellkonverter
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('82321c8a1bad0392f898462a6d8a1d60')
b2sums=('2a169e4f806dbc3d25e3007f19e58af0131c9be397a2a69d7e738fa91d6f94c8fe8fd917e5725d8d3221b7a8a58ee03873d1c390660a7cb59d17dc52c221f809')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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