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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=HPiP
_pkgver=1.6.0
pkgname=r-${_pkgname,,}
pkgver=1.6.0
pkgrel=1
pkgdesc='Host-Pathogen Interaction Prediction'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-caret
r-corrplot
r-dplyr
r-ggplot2
r-httr
r-igraph
r-magrittr
r-proc
r-protr
r-prroc
r-purrr
r-readr
r-stringr
r-tibble
r-tidyr
r-mcl
)
optdepends=(
r-biocgenerics
r-biocstyle
r-biostrings
r-colorspace
r-e1071
r-ggthemes
r-gprofiler2
r-gridextra
r-kernlab
r-knitr
r-randomforest
r-ranger
r-rmarkdown
r-runit
r-summarizedexperiment
r-tools
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('8aed6c3f809543b42a91bfb9a9e1a4640d2c9a58b9448189cef5b2afead72701')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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