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# system requirements: GNU make
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=lpsymphony
_pkgver=1.26.2
pkgname=r-${_pkgname,,}
pkgver=1.26.2
pkgrel=1
pkgdesc='Symphony integer linear programming solver in R'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('EPL')
depends=(
r
coin-or-asl
coin-or-clp
coin-or-coinutils
coin-or-osi
coin-or-cgl
make
glpk
)
optdepends=(
r-biocstyle
r-knitr
r-slam
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('a33e850526b2ab7299caca862cbfb7110b317c421dcfce047fc7be338fbbff98')
prepare() {
sed -i 's#CXXFLAGS="-w -g -O2"#CXXFLAGS="-w -g -O2 -I/usr/include/coin"#' "${srcdir}/${_pkgname}/configure"
tar cfz "${_pkgname}.tar.gz" "${_pkgname}"
}
build() {
#R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
R CMD INSTALL ${_pkgname}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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