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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=marinerData
_pkgver=1.2.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="ExperimentHub data for the mariner package"
arch=(any)
url="https://bioconductor.org/packages/${_pkgname}"
license=(GPL3)
depends=(
r-experimenthub
)
checkdepends=(
r-testthat
)
optdepends=(
r-experimenthubdata
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('7875113ebb6baaaed6eb6fc762ba92ca')
sha256sums=('409193a16e446a6aac69760421b40e0ad5f6ac562740839a49787a28a3c9a102')
build() {
mkdir -p build
R CMD INSTALL "$_pkgname" -l build
}
check() {
cd "$_pkgname/tests"
R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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