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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=MAST
_pkgver=1.26.0
pkgname=r-${_pkgname,,}
pkgver=1.26.0
pkgrel=1
pkgdesc='Model-based Analysis of Single Cell Transcriptomics'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-abind
r-biobase
r-biocgenerics
r-data.table
r-ggplot2
r-plyr
r-progress
r-reshape2
r-s4vectors
r-singlecellexperiment
r-stringr
r-summarizedexperiment
)
optdepends=(
r-biocstyle
r-blme
r-car
r-delayedarray
r-dplyr
r-gdata
r-ggally
r-gseabase
r-hdf5array
r-knitr
r-lattice
r-limma
r-lme4
r-matrix
r-nmf
r-numderiv
r-rcolorbrewer
r-rmarkdown
r-roxygen2
r-rsvd
r-scater
r-testthat
r-txdb.hsapiens.ucsc.hg19.knowngene
r-zinbwave
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('9d7960b856fa49067e1ede4ee114275576d3b64e3e69ab583591e56595d8a76e')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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