blob: adb662d718f2237eec9dc03f1ef1de8b3183151b (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
|
# Maintainer: peippo <christoph+aur@christophfink.com>
# Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com
_bcname=MatrixGenerics
_bcver=1.14.0
pkgname=r-${_bcname,,}
pkgdesc="S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects"
url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
pkgver=${_bcver//[:-]/.}
pkgrel=1
arch=("any")
license=("Artistic2.0")
depends=(
"r"
"r-matrixstats>=1.0.0"
)
optdepends=(
"r-delayedarray"
"r-delayedmatrixstats"
"r-sparsearray"
"r-sparsematrixstats"
"r-summarizedexperiment"
"r-testthat>=2.1.0"
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
b2sums=('de9621da52a3a4c6e4bace60b20dddb2182d7560a3db815108dca734f5b18812fe0861e30f7f328c4e44d51157ef1481048d50a2fb424dc1f4731771bb83c613')
build() {
R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_bcname}" "${pkgdir}/usr/lib/R/library"
if [[ -f "${_bcname}/LICENSE" ]]; then
install -Dm0644 "${_bcname}/LICENSE" "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE"
fi
}
|