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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=MethylSeekR
_pkgver=1.48.0
pkgname=r-${_pkgname,,}
pkgver=1.48.0
pkgrel=1
pkgdesc='Segmentation of Bis-seq data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-bsgenome
r-geneplotter
r-genomicranges
r-iranges
r-mhsmm
r-rtracklayer
)
optdepends=(
r-bsgenome.hsapiens.ucsc.hg18
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('a5e912affeb3b558c2bf1be2ab437ee59d0929e832737044c3d0956ad6793f7b')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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