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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=multicrispr
_pkgver=1.8.0
pkgname=r-${_pkgname,,}
pkgver=1.8.0
pkgrel=1
pkgdesc='Multi-locus multi-purpose Crispr/Cas design'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-assertive
r-biocgenerics
r-biostrings
r-bsgenome
r-crisprseek
r-data.table
r-genomeinfodb
r-genomicfeatures
r-genomicranges
r-ggplot2
r-karyoploter
r-magrittr
r-plyranges
r-rbowtie
r-reticulate
r-rtracklayer
r-stringi
r-tidyr
r-tidyselect
)
optdepends=(
r-annotationhub
r-biocstyle
r-bsgenome.hsapiens.ucsc.hg38
r-bsgenome.mmusculus.ucsc.mm10
r-bsgenome.scerevisiae.ucsc.saccer1
r-ensembldb
r-iranges
r-knitr
r-magick
r-rmarkdown
r-testthat
r-txdb.mmusculus.ucsc.mm10.knowngene
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('5f917dfeff94ff8e77a04d66ed61885e647964d213f7a5d943ab1f77d060629d')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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