summarylogtreecommitdiffstats
path: root/PKGBUILD
blob: 2048c53eb7dc5a040dc62f53d06ebce7b254c05f (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=PCAN
_pkgver=1.38.0
pkgname=r-${_pkgname,,}
pkgver=1.38.0
pkgrel=1
pkgdesc='Phenotype Consensus ANalysis (PCAN)'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('CCPL:by-nc-sa')
depends=(
  r
  r-biocparallel
)
optdepends=(
  r-biocstyle
  r-knitr
  r-reactome.db
  r-rmarkdown
  r-stringdb
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('3be70d4a3d1305f7492725a4e65c2677a1bfaf26b1a45085dc9fc8584bce6c95')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: