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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=pepXMLTab
_pkgver=1.36.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=2
pkgdesc="Parsing pepXML files and filter based on peptide FDR"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-xml
)
optdepends=(
r-biocgenerics
r-runit
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('71d6bcb41c5a79bc2cfdd375c6468250')
b2sums=('37e0d23e667c4f3720a7bf0305152c7f4540058cdba396edb13e7c1848b26a806bdbd840f6d133c9124ad7202c940e5c7963b8fa004420b6f94592e4404074e8')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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